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Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns

Weischenfeldt, Joachim ; Waage, Johannes ; Tian, Geng ; Zhao, Jing ; Damgaard, Inge ; Jakobsen, Janus Schou ; Kristiansen, Karsten ; Krogh, Anders ; Wang, Jun ; Porse, Bo T

Genome Biology, 2012, Vol.13(5), p.R35-R35 [Peer Reviewed Journal]

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An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia

Rasmussen, Morten ; Guo, Xiaosen ; Wang, Yong ; Lohmueller, Kirk E. ; Rasmussen, Simon ; Albrechtsen, Anders ; Skotte, Line ; Lindgreen, Stinus ; Metspalu, Mait ; Jombart, Thibaut ; Kivisild, Toomas ; Zhai, Weiwei ; Eriksson, Anders ; Manica, Andrea ; Orlando, Ludovic ; De La Vega, Francisco M. ; Tridico, Silvana ; Metspalu, Ene ; Nielsen, Kasper ; Ávila-Arcos, María C. ; Moreno-Mayar, J. Víctor ; Muller, Craig ; Dortch, Joe ; Gilbert, M. Thomas P. ; Lund, Ole ; Wesolowska, Agata ; Karmin, Monika ; Weinert, Lucy A. ; Wang, Bo ; Li, Jun ; Tai, Shuaishuai ; Xiao, Fei ; Hanihara, Tsunehiko ; Van Driem, George ; Jha, Aashish R. ; Ricaut, François-Xavier ; De Knijff, Peter ; Migliano, Andrea B ; Romero, Irene Gallego ; Kristiansen, Karsten ; Lambert, David M. ; Brunak, Søren ; Forster, Peter ; Brinkmann, Bernd ; Nehlich, Olaf ; Bunce, Michael ; Richards, Michael ; Gupta, Ramneek ; Bustamante, Carlos D. ; Krogh, Anders ; Foley, Robert A. ; Lahr, Marta M. ; Balloux, Francois ; Sicheritz-Pontén, Thomas ; Villems, Richard ; Nielsen, Rasmus ; Wang, Jun ; Willerslev, Eske

Science, 7 October 2011, Vol.334(6052), pp.94-98 [Peer Reviewed Journal]

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A human gut microbial gene catalogue established by metagenomic sequencing.(Report)

Qin, Junjie ; Li, Ruiqiang ; Raes, Jeroen ; Arumugam, Manimozhiyan ; Burgdorf, Kristoffer Solvsten ; Manichanh, Chaysavanh ; Nielsen, Trine ; Pons, Nicolas ; Levenez, Florence ; Yamada, Takuji ; Mende, Daniel R ; Li, Junhua ; Xu, Junming ; Li, Shaochuan ; Li, Dongfang ; Cao, Jianjun ; Wang, Bo ; Liang, Huiqing ; Zheng, Huisong ; Xie, Yinlong ; Tap, Julien ; Lepage, Patricia ; Bertalan, Marcelo ; Batto, Jean-Michel ; Hansen, Torben ; Le Paslier, Denis ; Linneberg, Allan ; Nielsen, H Bjørn ; Pelletier, Eric ; Renault, Pierre ; Sicheritz-Ponten, Thomas ; Turner, Keith ; Zhu, Hongmei ; Yu, Chang ; Li, Shengting ; Jian, Min ; Zhou, Yan ; Li, Yingrui ; Zhang, Xiuqing ; Li, Songgang ; Qin, Nan ; Yang, Huanming ; Wang, Jian ; Brunak, Søren ; Doré, Joel ; Guarner, Francisco ; Kristiansen, Karsten ; Pedersen, Oluf ; Parkhill, Julian ; Weissenbach, Jean ; Bork, Peer ; Ehrlich, S Dusko ; Wang, Jun;

Nature, March 4, 2010, Vol.464(7285), p.59(9) [Peer Reviewed Journal]

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4
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The sequence and de novo assembly of the giant panda genome.(Report)

Li, Ruiqiang ; Fan, Wei ; Tian, Geng ; Zhu, Hongmei ; He, Lin ; Cai, Jing ; Huang, Quanfei ; Cai, Qingle ; Li, Bo ; Bai, Yinqi ; Zhang, Zhihe ; Zhang, Yaping ; Wang, Wen ; Li, Jun ; Wei, Fuwen ; Li, Heng ; Jian, Min ; Li, Jianwen ; Zhang, Zhaolei ; Nielsen, Rasmus ; Li, Dawei ; Gu, Wanjun ; Yang, Zhentao ; Xuan, Zhaoling ; Ryder, Oliver A ; Leung, Frederick Chi-Ching ; Zhou, Yan ; Cao, Jianjun ; Sun, Xiao ; Fu, Yonggui ; Fang, Xiaodong ; Guo, Xiaosen ; Wang, Bo ; Hou, Rong ; Shen, Fujun ; Mu, Bo ; Ni, Peixiang ; Lin, Runmao ; Qian, Wubin ; Wang, Guodong ; Yu, Chang ; Nie, Wenhui ; Wang, Jinhuan ; Wu, Zhigang ; Liang, Huiqing ; Min, Jiumeng ; Wu, Qi ; Cheng, Shifeng ; Ruan, Jue ; Wang, Mingwei ; Shi, Zhongbin ; Wen, Ming ; Liu, Binghang ; Ren, Xiaoli ; Zheng, Huisong ; Dong, Dong ; Cook, Kathleen ; Shan, Gao ; Zhang, Hao ; Kosiol, Carolin ; Xie, Xueying ; Lu, Zuhong ; Zheng, Hancheng ; Li, Yingrui ; Steiner, Cynthia C ; Lam, Tommy Tsan-Yuk ; Lin, Siyuan ; Zhang, Qinghui ; Li, Guoqing ; Tian, Jing ; Gong, Timing ; Liu, Hongde ; Zhang, Dejin ; Fang, Lin ; Ye, Chen ; Zhang, Juanbin ; Hu, Wenbo ; Xu, Anlong ; Ren, Yuanyuan ; Zhang, Guojie ; Bruford, Michael W ; Li, Qibin ; Ma, Lijia ; Guo, Yiran ; An, Na ; Hu, Yujie ; Zheng, Yang ; Shi, Yongyong ; Li, Zhiqiang ; Liu, Qing ; Chen, Yanling ; Zhao, Jing ; Qu, Ning ; Zhao, Shancen ; Tian, Feng ; Wang, Xiaoling ; Wang, Haiyin ; Xu, Lizhi ; Liu, Xiao ; Vinar, Tomas ; Wang, Yajun ; Lam, Tak-Wah ; Yiu, Siu-Ming ; Liu, Shiping ; Zhang, Hemin ; Li, Desheng ; Huang, Yan ; Wang, Xia ; Yang, Guohua ; Jiang, Zhi ; Wang, Junyi ; Qin, Nan ; Li, Li ; Li, Jingxiang ; Bolund, Lars ; Kristiansen, Karsten ; Wong, Gane Ka-Shu ; Olson, Maynard ; Zhang, Xiuqing ; Li, Songgang ; Yang, Huanming ; Wang, Jian ; Wang, Jun;

Nature, Jan 21, 2010, Vol.463(7279), p.311(7) [Peer Reviewed Journal]

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Ancient human genome sequence of an extinct Palaeo-Eskimo

Rasmussen, Morten ; Li, Yingrui ; Lindgreen, Stinus ; Pedersen, Jakob ; Albrechtsen, Anders ; Moltke, Ida ; Metspalu, Mait ; Metspalu, Ene ; Kivisild, Toomas ; Gupta, Ramneek ; Bertalan, Marcelo ; Nielsen, Kasper ; Gilbert, M ; Wang, Yong ; Raghavan, Maanasa ; Campos, Paula ; Kamp, Hanne ; Wilson, Andrew ; Gledhill, Andrew ; Tridico, Silvana ; Bunce, Michael ; Lorenzen, Eline ; Binladen, Jonas ; Guo, Xiaosen ; Zhao, Jing ; Zhang, Xiuqing ; Zhang, Hao ; Li, Zhuo ; Chen, Minfeng ; Orlando, Ludovic ; Kristiansen, Karsten ; Bak, Mads ; Tommerup, Niels ; Bendixen, Christian ; Pierre, Tracey ; Grønnow, Bjarne ; Meldgaard, Morten ; Andreasen, Claus ; Fedorova, Sardana ; Osipova, Ludmila ; Higham, Thomas ; Ramsey, Christopher ; Hansen, Thomas ; Nielsen, Finn ; Crawford, Michael ; Brunak, Søren ; Sicheritz-Pontén, Thomas ; Villems, Richard ; Nielsen, Rasmus ; Krogh, Anders ; Wang, Jun ; Willerslev, Eske;

Nature, Feb 11, 2010, Vol.463(7282), p.757(6) [Peer Reviewed Journal]

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Sequencing of 50 human exomes reveals adaptation to high altitude.(REPORTS)(Author abstract)(Report)

Yi, Xin ; Yu, Liang ; Huerta-Sanchez, Emilia ; Jin, Xin ; Pool, John ; Xu, Xun ; Jiang, Hui ; Vinckenbosch, Nicolas ; Zheng, Hancheng ; Liu, Tao ; He, Weiming ; Li, Kui ; Luo, Ruibang ; Nie, Xifang ; Wu, Honglong ; Zhao, Meiru;

Science, July 2, 2010, Vol.329(5987), p.75(4) [Peer Reviewed Journal]

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7
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Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder.(Letter to the editor)

Gui, Yaoting ; Guo, Guangwu ; Huang, Yi ; Hu, Xueda ; Tang, Aifa ; Gao, Shengjie ; Wu, Renhua ; Chen, Chao ; Li, Xianxin ; Zhou, Liang ; He, Minghui ; Li, Zesong ; Sun, Xiaojuan ; Jia, Wenlong ; Chen, Jinnong ; Yang, Shangming ; Zhou, Fangjian ; Zhao, Xiaokun ; Wan, Shengqing ; Ye, Rui ; Liang, Chaozhao ; Liu, Zhisheng ; Huang, Peide ; Liu, Chunxiao ; Jiang, Hui ; Wang, Yong ; Zheng, Hancheng ; Sun, Liang ; Liu, Xingwang ; Jiang, Zhimao ; Feng, Dafei ; Chen, Jing ; Wu, Song ; Zou, Jing ; Zhang, Zhongfu ; Yang, Ruilin ; Zhao, Jun ; Xu, Congjie ; Yin, Weihua ; Guan, Zhichen ; Ye, Jiongxian ; Zhang, Hong ; Li, Jingxiang ; Kristiansen, Karsten ; Nickerson, Michael L ; Theodorescu, Dan ; Li, Yingrui ; Zhang, Xiuqing ; Li, Songgang ; Wang, Jian ; Yang, Huanming ; Wang, Jun ; Cai, Zhiming;

Nature Genetics, Sept, 2011, Vol.43(9), p.875(5) [Peer Reviewed Journal]

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8
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An integrated catalog of reference genes in the human gut microbiome.(RESOURCE)(Report)

Li, Junhua ; Jia, Huijue ; Cai, Xianghang ; Zhong, Huanzi ; Feng, Qiang ; Sunagawa, Shinichi ; Arumugam, Manimozhiyan ; Kultima, Jens Roat ; Prifti, Edi ; Nielsen, Trine ; Juncker, Agnieszka Sierakowska ; Manichanh, Chaysavanh ; Chen, Bing ; Zhang, Wenwei ; Levenez, Florence ; Wang, Juan ; Xu, Xun ; Xiao, Liang ; Liang, Suisha ; Zhang, Dongya ; Zhang, Zhaoxi ; Chen, Weineng ; Zhao, Hailong ; Al-Aama, Jumana Yousuf ; Edris, Sherif ; Yang, Huanming ; Wang, Jian ; Hansen, Torben ; Nielsen, Henrik Bjørn ; Brunak, Søren ; Kristiansen, Karsten ; Guarner, Francisco ; Pedersen, Oluf ; Doré, Joel ; Ehrlich, S Dusko ; Bork, Peer ; Wang, Jun;

Nature Biotechnology, 2014, Vol.32(8), p.834(12) [Peer Reviewed Journal]

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Transcriptome and Network Changes in Climbers at Extreme Altitudes (Transcriptome Changes at Extreme Altitudes)

Chen, Fang ; Zhang, Wei ; Liang, Yu ; Huang, Jialiang ; Li, Kui ; Green, Christopher D ; Liu, Jiancheng ; Zhang, Guojie ; Zhou, Bing ; Yi, Xin ; Wang, Wei ; Liu, Hang ; Xu, Xiaohong ; Shen, Feng ; Qu, Ning ; Wang, Yading ; Gao, Guoyi ; San, A ; JiangBai, LuoSang ; Sang, Hua ; Fang, Xiangdong ; Kristiansen, Karsten ; Yang, Huanming ; Wang, Jun ; Han, Jing-Dong J ; Wang, Jian Ouzounis, Christos A. (Editor)

PLoS ONE, 2012, Vol.7(2), p.e31645 [Peer Reviewed Journal]

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Whole-Exome Sequencing of 2,000 Danish Individuals and the Role of Rare Coding Variants in Type 2 Diabetes.(Report)(Author abstract)

American Journal of Human Genetics, Dec 5, 2013, Vol.93(6), p.1072(15) [Peer Reviewed Journal]

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