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1
Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer
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Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer

Balachandran, Vinod P ; Łuksza, Marta ; Zhao, Julia N ; Makarov, Vladimir ; Moral, John Alec ; Remark, Romain ; Herbst, Brian ; Askan, Gokce ; Bhanot, Umesh ; Senbabaoglu, Yasin ; Wells, Daniel K ; Cary, Charles Ian Ormsby ; Grbovic-Huezo, Olivera ; Attiyeh, Marc ; Medina, Benjamin ; Zhang, Jennifer ; Loo, Jennifer ; Saglimbeni, Joseph ; Abu-Akeel, Mohsen ; Zappasodi, Roberta ; Riaz, Nadeem ; Smoragiewicz, Martin ; Kelley, Z. Larkin ; Basturk, Olca ; Gönen, Mithat ; Levine, Arnold J ; Allen, Peter J ; Fearon, Douglas T ; Merad, Miriam ; Gnjatic, Sacha ; Iacobuzio-Donahue, Christine A ; Wolchok, Jedd D ; DeMatteo, Ronald P ; Chan, Timothy A ; Greenbaum, Benjamin D ; Merghoub, Taha ; Leach, Steven D

Nature (London), 2017-11-08, Vol.551 (7681), p.512-516 [Peer Reviewed Journal]

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2
Genomic analyses identify molecular subtypes of pancreatic cancer
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Genomic analyses identify molecular subtypes of pancreatic cancer

Bailey, Peter ; Chang, David K ; Nones, Katia ; Johns, Amber L ; Patch, Ann-Marie ; Gingras, Marie-Claude ; Miller, David K ; Christ, Angelika N ; Bruxner, Tim J. C ; Quinn, Michael C ; Nourse, Craig ; Murtaugh, L. Charles ; Harliwong, Ivon ; Idrisoglu, Senel ; Manning, Suzanne ; Nourbakhsh, Ehsan ; Wani, Shivangi ; Fink, Lynn ; Holmes, Oliver ; Chin, Venessa ; Anderson, Matthew J ; Kazakoff, Stephen ; Leonard, Conrad ; Newell, Felicity ; Waddell, Nick ; Wood, Scott ; Xu, Qinying ; Wilson, Peter J ; Cloonan, Nicole ; Kassahn, Karin S ; Taylor, Darrin ; Quek, Kelly ; Robertson, Alan ; Pantano, Lorena ; Mincarelli, Laura ; Sanchez, Luis N ; Evers, Lisa ; Wu, Jianmin ; Pinese, Mark ; Cowley, Mark J ; Jones, Marc D ; Colvin, Emily K ; Nagrial, Adnan M ; Humphrey, Emily S ; Chantrill, Lorraine A ; Mawson, Amanda ; Humphris, Jeremy ; Chou, Angela ; Pajic, Marina ; Scarlett, Christopher J ; Pinho, Andreia V ; Giry-Laterriere, Marc ; Rooman, Ilse ; Samra, Jaswinder S ; Kench, James G ; Lovell, Jessica A ; Merrett, Neil D ; Toon, Christopher W ; Epari, Krishna ; Nguyen, Nam Q ; Barbour, Andrew ; Zeps, Nikolajs ; Moran-Jones, Kim ; Jamieson, Nigel B ; Graham, Janet S ; Duthie, Fraser ; Oien, Karin ; Hair, Jane ; Grützmann, Robert ; Maitra, Anirban ; Iacobuzio-Donahue, Christine A ; Wolfgang, Christopher L ; Morgan, Richard A ; Lawlor, Rita T ; Corbo, Vincenzo ; Bassi, Claudio ; Rusev, Borislav ; Capelli, Paola ; Salvia, Roberto ; Tortora, Giampaolo ; Mukhopadhyay, Debabrata ; Petersen, Gloria M ; Munzy, Donna M ; Fisher, William E ; Karim, Saadia A ; Eshleman, James R ; Hruban, Ralph H ; Pilarsky, Christian ; Morton, Jennifer P ; Sansom, Owen J ; Scarpa, Aldo ; Musgrove, Elizabeth A ; Bailey, Ulla-Maja Hagbo ; Hofmann, Oliver ; Sutherland, Robert L ; Wheeler, David A ; Gill, Anthony J ; Gibbs, Richard A ; Pearson, John V ; Waddell, Nicola ; ...

Nature (London), 2016-02-24, Vol.531 (7592), p.47-52 [Peer Reviewed Journal]

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3
Whole genomes redefine the mutational landscape of pancreatic cancer
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Whole genomes redefine the mutational landscape of pancreatic cancer

Waddell, Nicola ; Pajic, Marina ; Patch, Ann-Marie ; Chang, David K ; Kassahn, Karin S ; Bailey, Peter ; Johns, Amber L ; Miller, David ; Nones, Katia ; Quek, Kelly ; Quinn, Michael C. J ; Robertson, Alan J ; Fadlullah, Muhammad Z. H ; Bruxner, Tim J. C ; Christ, Angelika N ; Harliwong, Ivon ; Idrisoglu, Senel ; Manning, Suzanne ; Nourse, Craig ; Nourbakhsh, Ehsan ; Wani, Shivangi ; Wilson, Peter J ; Markham, Emma ; Cloonan, Nicole ; Anderson, Matthew J ; Fink, J. Lynn ; Holmes, Oliver ; Kazakoff, Stephen H ; Leonard, Conrad ; Newell, Felicity ; Poudel, Barsha ; Song, Sarah ; Taylor, Darrin ; Waddell, Nick ; Wood, Scott ; Xu, Qinying ; Wu, Jianmin ; Pinese, Mark ; Cowley, Mark J ; Lee, Hong C ; Jones, Marc D ; Nagrial, Adnan M ; Humphris, Jeremy ; Chantrill, Lorraine A ; Chin, Venessa ; Steinmann, Angela M ; Mawson, Amanda ; Humphrey, Emily S ; Colvin, Emily K ; Chou, Angela ; Scarlett, Christopher J ; Pinho, Andreia V ; Giry-Laterriere, Marc ; Rooman, Ilse ; Samra, Jaswinder S ; Kench, James G ; Pettitt, Jessica A ; Merrett, Neil D ; Toon, Christopher ; Epari, Krishna ; Nguyen, Nam Q ; Barbour, Andrew ; Zeps, Nikolajs ; Jamieson, Nigel B ; Graham, Janet S ; Niclou, Simone P ; Bjerkvig, Rolf ; Grützmann, Robert ; Aust, Daniela ; Hruban, Ralph H ; Maitra, Anirban ; Iacobuzio-Donahue, Christine A ; Wolfgang, Christopher L ; Morgan, Richard A ; Lawlor, Rita T ; Corbo, Vincenzo ; Bassi, Claudio ; Falconi, Massimo ; Zamboni, Giuseppe ; Tortora, Giampaolo ; Tempero, Margaret A ; Gill, Anthony J ; Eshleman, James R ; Pilarsky, Christian ; Scarpa, Aldo ; Musgrove, Elizabeth A ; Pearson, John V ; Biankin, Andrew V ; Grimmond, Sean M

Nature (London), 2015-02-25, Vol.518 (7540), p.495-501 [Peer Reviewed Journal]

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4
Whole-genome landscape of pancreatic neuroendocrine tumours
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Whole-genome landscape of pancreatic neuroendocrine tumours

Scarpa, Aldo ; Chang, David K ; Nones, Katia ; Corbo, Vincenzo ; Patch, Ann-Marie ; Bailey, Peter ; Lawlor, Rita T ; Johns, Amber L ; Miller, David K ; Mafficini, Andrea ; Rusev, Borislav ; Scardoni, Maria ; Antonello, Davide ; Barbi, Stefano ; Sikora, Katarzyna O ; Cingarlini, Sara ; Vicentini, Caterina ; McKay, Skye ; Quinn, Michael C. J ; Bruxner, Timothy J. C ; Christ, Angelika N ; Harliwong, Ivon ; Idrisoglu, Senel ; McLean, Suzanne ; Nourse, Craig ; Nourbakhsh, Ehsan ; Wilson, Peter J ; Anderson, Matthew J ; Fink, J. Lynn ; Newell, Felicity ; Waddell, Nick ; Holmes, Oliver ; Kazakoff, Stephen H ; Leonard, Conrad ; Wood, Scott ; Xu, Qinying ; Nagaraj, Shivashankar Hiriyur ; Amato, Eliana ; Dalai, Irene ; Bersani, Samantha ; Cataldo, Ivana ; Dei Tos, Angelo P ; Capelli, Paola ; Davì, Maria Vittoria ; Landoni, Luca ; Malpaga, Anna ; Miotto, Marco ; Whitehall, Vicki L. J ; Leggett, Barbara A ; Harris, Janelle L ; Harris, Jonathan ; Jones, Marc D ; Humphris, Jeremy ; Chantrill, Lorraine A ; Chin, Venessa ; Nagrial, Adnan M ; Pajic, Marina ; Scarlett, Christopher J ; Pinho, Andreia ; Rooman, Ilse ; Toon, Christopher ; Wu, Jianmin ; Pinese, Mark ; Cowley, Mark ; Barbour, Andrew ; Mawson, Amanda ; Humphrey, Emily S ; Colvin, Emily K ; Chou, Angela ; Lovell, Jessica A ; Jamieson, Nigel B ; Duthie, Fraser ; Gingras, Marie-Claude ; Fisher, William E ; Dagg, Rebecca A ; Lau, Loretta M. S ; Lee, Michael ; Pickett, Hilda A ; Reddel, Roger R ; Samra, Jaswinder S ; Kench, James G ; Merrett, Neil D ; Epari, Krishna ; Nguyen, Nam Q ; Zeps, Nikolajs ; Falconi, Massimo ; Simbolo, Michele ; Butturini, Giovanni ; Van Buren, George ; Partelli, Stefano ; Fassan, Matteo ; Khanna, Kum Kum ; Gill, Anthony J ; Wheeler, David A ; Gibbs, Richard A ; Musgrove, Elizabeth A ; Bassi, Claudio ; Tortora, Giampaolo ; Pederzoli, Paolo ; Pearson, John V ; ...

Nature (London), 2017-02-15, Vol.543 (7643), p.65-71 [Peer Reviewed Journal]

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5
The zebrafish reference genome sequence and its relationship to the human genome
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The zebrafish reference genome sequence and its relationship to the human genome

Howe, Kerstin ; Clark, Matthew D ; Torroja, Carlos F ; Torrance, James ; Berthelot, Camille ; Muffato, Matthieu ; Collins, John E ; Humphray, Sean ; McLaren, Karen ; Matthews, Lucy ; McLaren, Stuart ; Sealy, Ian ; Caccamo, Mario ; Churcher, Carol ; Scott, Carol ; Barrett, Jeffrey C ; Koch, Romke ; Rauch, Gerd-Jörg ; White, Simon ; Chow, William ; Kilian, Britt ; Quintais, Leonor T ; Guerra-Assunção, José A ; Zhou, Yi ; Gu, Yong ; Yen, Jennifer ; Vogel, Jan-Hinnerk ; Eyre, Tina ; Redmond, Seth ; Banerjee, Ruby ; Chi, Jianxiang ; Fu, Beiyuan ; Langley, Elizabeth ; Maguire, Sean F ; Laird, Gavin K ; Lloyd, David ; Kenyon, Emma ; Donaldson, Sarah ; Sehra, Harminder ; Almeida-King, Jeff ; Loveland, Jane ; Trevanion, Stephen ; Jones, Matt ; Quail, Mike ; Willey, Dave ; Hunt, Adrienne ; Burton, John ; Sims, Sarah ; McLay, Kirsten ; Plumb, Bob ; Davis, Joy ; Clee, Chris ; Oliver, Karen ; Clark, Richard ; Riddle, Clare ; Elliott, David ; Threadgold, Glen ; Harden, Glenn ; Ware, Darren ; Begum, Sharmin ; Mortimore, Beverley ; Kerry, Giselle ; Heath, Paul ; Phillimore, Benjamin ; Tracey, Alan ; Corby, Nicole ; Dunn, Matthew ; Johnson, Christopher ; Wood, Jonathan ; Clark, Susan ; Pelan, Sarah ; Griffiths, Guy ; Smith, Michelle ; Glithero, Rebecca ; Howden, Philip ; Barker, Nicholas ; Lloyd, Christine ; Stevens, Christopher ; Harley, Joanna ; Holt, Karen ; Panagiotidis, Georgios ; Lovell, Jamieson ; Beasley, Helen ; Henderson, Carl ; Gordon, Daria ; Auger, Katherine ; Wright, Deborah ; Collins, Joanna ; Raisen, Claire ; Dyer, Lauren ; Leung, Kenric ; Robertson, Lauren ; Ambridge, Kirsty ; Leongamornlert, Daniel ; McGuire, Sarah ; Gilderthorp, Ruth ; Griffiths, Coline ; Manthravadi, Deepa ; Nichol, Sarah ; Barker, Gary ; ...

Nature (London), 2013-04-17, Vol.496 (7446), p.498-503 [Peer Reviewed Journal]

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6
The DNA sequence of the human X chromosome
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The DNA sequence of the human X chromosome

Ross, Mark T ; Grafham, Darren V ; Coffey, Alison J ; Scherer, Steven ; McLay, Kirsten ; Muzny, Donna ; Platzer, Matthias ; Howell, Gareth R ; Burrows, Christine ; Bird, Christine P ; Frankish, Adam ; Lovell, Frances L ; Howe, Kevin L ; Ashurst, Jennifer L ; Fulton, Robert S ; Sudbrak, Ralf ; Wen, Gaiping ; Jones, Matthew C ; Hurles, Matthew E ; Andrews, T. Daniel ; Scott, Carol E ; Searle, Stephen ; Ramser, Juliane ; Whittaker, Adam ; Deadman, Rebecca ; Carter, Nigel P ; Hunt, Sarah E ; Chen, Rui ; Cree, Andrew ; Gunaratne, Preethi ; Havlak, Paul ; Hodgson, Anne ; Metzker, Michael L ; Richards, Stephen ; Scott, Graham ; Steffen, David ; Sodergren, Erica ; Wheeler, David A ; Worley, Kim C ; Ainscough, Rachael ; Ambrose, Kerrie D ; Ansari-Lari, M. Ali ; Aradhya, Swaroop ; Ashwell, Robert I. S ; Babbage, Anne K ; Bagguley, Claire L ; Ballabio, Andrea ; Banerjee, Ruby ; Barker, Gary E ; Barlow, Karen F ; Barrett, Ian P ; Bates, Karen N ; Beare, David M ; Beasley, Helen ; Beasley, Oliver ; Beck, Alfred ; Bethel, Graeme ; Blechschmidt, Karin ; Brady, Nicola ; Bray-Allen, Sarah ; Bridgeman, Anne M ; Brown, Andrew J ; Brown, Mary J ; Bonnin, David ; Bruford, Elspeth A ; Buhay, Christian ; Burch, Paula ; Burford, Deborah ; Burgess, Joanne ; Burrill, Wayne ; Burton, John ; Bye, Jackie M ; Carder, Carol ; Carrel, Laura ; Chako, Joseph ; Chapman, Joanne C ; Chavez, Dean ; Chen, Ellson ; Chen, Guan ; Chen, Yuan ; Chen, Zhijian ; Chinault, Craig ; Ciccodicola, Alfredo ; Clark, Sue Y ; Clarke, Graham ; Clee, Chris M ; Clegg, Sheila ; Clerc-Blankenburg, Kerstin ; Clifford, Karen ; Cobley, Vicky ; Cole, Charlotte G ; Conquer, Jen S ; Corby, Nicole ; Connor, Richard E ; David, Robert ; Davies, Joy ; Davis, Clay ; Davis, John ; Delgado, Oliver ; DeShazo, Denise ; ...

Nature (London), 2005-03, Vol.434 (7031), p.325-337 [Peer Reviewed Journal]

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7
Pan-cancer analysis of whole genomes
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Pan-cancer analysis of whole genomes

Campbell, Peter J ; Getz, Gad ; Korbel, Jan O ; Stuart, Joshua M ; Jennings, Jennifer L ; Stein, Lincoln D ; Perry, Marc D ; Nahal-Bose, Hardeep K ; Ouellette, B. F. Francis ; Li, Constance H ; Rheinbay, Esther ; Nielsen, G. Petur ; Sgroi, Dennis C ; Wu, Chin-Lee ; Faquin, William C ; Deshpande, Vikram ; Boutros, Paul C ; Lazar, Alexander J ; Hoadley, Katherine A ; Louis, David N ; Dursi, L. Jonathan ; Yung, Christina K ; Bailey, Matthew H ; Saksena, Gordon ; Raine, Keiran M ; Buchhalter, Ivo ; Kleinheinz, Kortine ; Schlesner, Matthias ; Zhang, Junjun ; Wang, Wenyi ; Wheeler, David A ; Ding, Li ; Simpson, Jared T ; O’Connor, Brian D ; Yakneen, Sergei ; Ellrott, Kyle ; Miyoshi, Naoki ; Butler, Adam P ; Royo, Romina ; Shorser, Solomon I ; Vazquez, Miguel ; Rausch, Tobias ; Liu, Jia ; Hooijer, Gerrit K ; van de Vijver, Marc J ; Kool, Marcel

Nature (London), 2020-02-05, Vol.578 (7793), p.82-93 [Peer Reviewed Journal]

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8
Constraint on the matter-antimatter symmetry-violating phase in neutrino oscillations
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Constraint on the matter-antimatter symmetry-violating phase in neutrino oscillations

Abe, K

Nature (London), 2020-04, Vol.580 (7803), p.339-344 [Peer Reviewed Journal]

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9
Erratum: Corrigendum: Whole-genome landscape of pancreatic neuroendocrine tumours
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Erratum: Corrigendum: Whole-genome landscape of pancreatic neuroendocrine tumours

Scarpa, Aldo ; Chang, David K ; Nones, Katia ; Corbo, Vincenzo ; Patch, Ann-Marie ; Bailey, Peter ; Lawlor, Rita T ; Johns, Amber L ; Miller, David K ; Mafficini, Andrea ; Rusev, Borislav ; Scardoni, Maria ; Antonello, Davide ; Barbi, Stefano ; Sikora, Katarzyna O ; Cingarlini, Sara ; Vicentini, Caterina ; McKay, Skye ; Quinn, Michael C. J ; Bruxner, Timothy J. C ; Christ, Angelika N ; Harliwong, Ivon ; Idrisoglu, Senel ; McLean, Suzanne ; Nourse, Craig ; Nourbakhsh, Ehsan ; Wilson, Peter J ; Anderson, Matthew J ; Fink, J. Lynn ; Newell, Felicity ; Waddell, Nick ; Holmes, Oliver ; Kazakoff, Stephen H ; Leonard, Conrad ; Wood, Scott ; Xu, Qinying ; Hiriyur Nagaraj, Shivashankar ; Amato, Eliana ; Dalai, Irene ; Bersani, Samantha ; Cataldo, Ivana ; Dei Tos, Angelo P ; Capelli, Paola ; Vittoria Davì, Maria ; Landoni, Luca ; Malpaga, Anna ; Miotto, Marco ; Whitehall, Vicki L. J ; Leggett, Barbara A ; Harris, Janelle L ; Harris, Jonathan ; Jones, Marc D ; Humphris, Jeremy ; Chantrill, Lorraine A ; Chin, Venessa ; Nagrial, Adnan M ; Pajic, Marina ; Scarlett, Christopher J ; Pinho, Andreia ; Rooman, Ilse ; Toon, Christopher ; Wu, Jianmin ; Pinese, Mark ; Cowley, Mark ; Barbour, Andrew ; Mawson, Amanda ; Humphrey, Emily S ; Colvin, Emily K ; Chou, Angela ; Lovell, Jessica A ; Jamieson, Nigel B ; Duthie, Fraser ; Gingras, Marie-Claude ; Fisher, William E ; Dagg, Rebecca A ; Lau, Loretta M. S ; Lee, Michael ; Pickett, Hilda A ; Reddel, Roger R ; Samra, Jaswinder S ; Kench, James G ; Merrett, Neil D ; Epari, Krishna ; Nguyen, Nam Q ; Zeps, Nikolajs ; Falconi, Massimo ; Simbolo, Michele ; Butturini, Giovanni ; Van Buren, George ; Partelli, Stefano ; Fassan, Matteo ; Khanna, Kum Kum ; Gill, Anthony J ; Wheeler, David A ; Gibbs, Richard A ; Musgrove, Elizabeth A ; Bassi, Claudio ; Tortora, Giampaolo ; Pederzoli, Paolo ; Pearson, John V ; ...

Nature (London), 2017-10, Vol.550 (7677), p.548-548 [Peer Reviewed Journal]

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10
Corrigendum: Whole-genome landscape of pancreatic neuroendocrine tumours
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Corrigendum: Whole-genome landscape of pancreatic neuroendocrine tumours

Scarpa, Aldo ; Chang, David K ; Nones, Katia ; Corbo, Vincenzo ; Patch, Ann-Marie ; Bailey, Peter ; Lawlor, Rita T ; Johns, Amber L ; Miller, David K ; Mafficini, Andrea ; Rusev, Borislav ; Scardoni, Maria ; Antonello, Davide ; Barbi, Stefano ; Sikora, Katarzyna O ; Cingarlini, Sara ; Vicentini, Caterina ; McKay, Skye ; Quinn, Michael C J ; Bruxner, Timothy J C ; Christ, Angelika N ; Harliwong, Ivon ; Idrisoglu, Senel ; McLean, Suzanne ; Nourse, Craig ; Nourbakhsh, Ehsan ; Wilson, Peter J ; Anderson, Matthew J ; Fink, J Lynn ; Newell, Felicity ; Waddell, Nick ; Holmes, Oliver ; Kazakoff, Stephen H ; Leonard, Conrad ; Wood, Scott ; Xu, Qinying ; Hiriyur Nagaraj, Shivashankar ; Amato, Eliana ; Dalai, Irene ; Bersani, Samantha ; Cataldo, Ivana ; Dei Tos, Angelo P ; Capelli, Paola ; Vittoria Davì, Maria ; Landoni, Luca ; Malpaga, Anna ; Miotto, Marco ; Whitehall, Vicki L J ; Leggett, Barbara A ; Harris, Janelle L ; Harris, Jonathan ; Jones, Marc D ; Humphris, Jeremy ; Chantrill, Lorraine A ; Chin, Venessa ; Nagrial, Adnan M ; Pajic, Marina ; Scarlett, Christopher J ; Pinho, Andreia ; Rooman, Ilse ; Toon, Christopher ; Wu, Jianmin ; Pinese, Mark ; Cowley, Mark ; Barbour, Andrew ; Mawson, Amanda ; Humphrey, Emily S ; Colvin, Emily K ; Chou, Angela ; Lovell, Jessica A ; Jamieson, Nigel B ; Duthie, Fraser ; Gingras, Marie-Claude ; Fisher, William E ; Dagg, Rebecca A ; Lau, Loretta M S ; Lee, Michael ; Pickett, Hilda A ; Reddel, Roger R ; Samra, Jaswinder S ; Kench, James G ; Merrett, Neil D ; Epari, Krishna ; Nguyen, Nam Q ; Zeps, Nikolajs ; Falconi, Massimo ; Simbolo, Michele ; Butturini, Giovanni ; Van Buren, George ; Partelli, Stefano ; Fassan, Matteo ; Khanna, Kum Kum ; Gill, Anthony J ; Wheeler, David A ; Gibbs, Richard A ; Musgrove, Elizabeth A ; Bassi, Claudio ; Tortora, Giampaolo ; Pederzoli, Paolo ; Pearson, John V ; ...

Nature (London), 2017-10-26, Vol.550 (7677), p.548-548 [Peer Reviewed Journal]

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