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Human genomic regions with exceptionally high levels of population differentiation identified from 911 whole-genome sequences

Colonna, Vincenza ; Ayub, Qasim ; Chen, Yuan ; Pagani, Luca ; Luisi, Pierre ; Pybus, Marc ; Garrison, Erik ; Xue, Yali ; Tyler-Smith, Chris

Genome Biology, 2014, Vol.15(6), p.R88-R88 [Peer Reviewed Journal]

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The Simons Genome Diversity Project: 300 genomes from 142 diverse populations.(Report)

Mallick, Swapan ; Li, Heng ; Lipson, Mark ; Mathieson, Iain ; Gymrek, Melissa ; Racimo, Fernando ; Zhao, Mengyao ; Chennagiri, Niru ; Nordenfelt, Susanne ; Tandon, Arti ; Skoglund, Pontus ; Lazaridis, Iosif ; Sankararaman, Sriram ; Fu, Qiaomei ; Rohland, Nadin ; Renaud, Gabriel ; Erlich, Yaniv ; Willems, Thomas ; Gallo, Carla ; Spence, Jeffrey P. ; Song, Yun S. ; Poletti, Giovanni ; Balloux, Francois ; Van Driem, George ; De Knijff, Peter ; Romero, Irene Gallego ; Jha, Aashish R. ; Behar, Doron M. ; Bravi, Claudio M. ; Capelli, Cristian ; Hervig, Tor ; Moreno - Estrada, Andres ; Posukh, Olga L. ; Balanovska, Elena ; Balanovsky, Oleg ; Karachanak - Yankova, Sena ; Sahakyan, Hovhannes ; Toncheva, Draga ; Yepiskoposyan, Levon ; Tyler - Smith, Chris ; Xue, Yali ; Abdullah, M. Syafiq ; Ruiz - Linares, Andres ; Beall, Cynthia M. ; Di Rienzo, Anna ; Jeong, Choongwon ; Starikovskaya, Elena B. ; Metspalu, Ene ; Parik, Jri ; Villems, Richard ; Henn, Brenna M. ; Hodoglugil, Ugur ; Mahley, Robert ; Sajantila, Antti ; Stamatoyannopoulos, George ; Wee, Joseph T. S. ; Khusainova, Rita ; Khusnutdinova, Elza ; Litvinov, Sergey ; Ayodo, George ; Comas, David ; Hammer, Michael F. ; Kivisild, Toomas ; Klitz, William ; Winkler, Cheryl A. ; Labuda, Damian ; Bamshad, Michael ; Jorde, Lynn B. ; Tishkoff, Sarah A. ; Watkins, W. Scott ; Metspalu, Mait ; Dryomov, Stanislav ; Sukernik, Rem ; Singh, Lalji ; Thangaraj, Kumarasamy ; Pbo, Svante ; Kelso, Janet ; Patterson, Nick ; Reich, David

Nature, Oct 13, 2016, Vol.538(7624), p.201 [Peer Reviewed Journal]

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A recent bottleneck of Y chromosome diversity coincides with a global change in culture.(Report)

Karmin, Monika ; Saag, Lauri ; Vicente, Mario ; Sayres, Melissa A. Wilson ; Jarve, Mari ; Talas, Ulvi Gerst ; Rootsi, Siiri ; Ilumae, Anne-Mai ; Magi, Reedik ; Mitt, Mario ; Pagani, Luca ; Puurand, Tarmo ; Faltyskova, Zuzana ; Clemente, Florian ; Cardona, Alexia ; Metspalu, Ene ; Sahakyan, Hovhannes ; Yunusbayev, Bayazit ; Hudjashov, Georgi ; Degiorgio, Michael ; Loogvali, Eva-Liis ; Eichstaedt, Christina ; Eelmets, Mikk ; Chaubey, Gyaneshwer ; Tambets, Kristiina ; Litvinov, Sergei ; Mormina, Maru ; Xue, Yali ; Ayub, Qasim ; Zoraqi, Grigor ; Korneliussen, Thorfinn Sand ; Akhatova, Farida ; Lachance, Joseph ; Tishkoff, Sarah ; Momynaliev, Kuvat ; Ricaut, Francois-Xavier ; Kusuma, Pradiptajati ; Razafindrazaka, Harilanto ; Pierron, Denis ; Cox, Murray P. ; Sultana, Gazi Nurun Nahar ; Willerslev, Rane ; Muller, Craig ; Westaway, Michael ; Lambert, David ; Skaro, Vedrana ; Kova?Evic, Lejla ; Turdikulova, Shahlo ; Dalimova, Dilbar ; Khusainova, Rita ; Trofimova, Natalya ; Akhmetova, Vita ; Khidiyatova, Irina ; Lichman, Daria V. ; Isakova, Jainagul ; Pocheshkhova, Elvira ; Sabitov, Zhaxylyk ; Barashkov, Nikolay A. ; Nymadawa, Pagbajabyn ; Mihailov, Evelin ; Seng, Joseph Wee Tien ; Evseeva, Irina ; Migliano, Andrea Bamberg ; Abdullah, Syafiq ; Andriadze, George ; Primorac, Dragan ; Atramentova, Lubov ; Utevska, Olga ; Yepiskoposyan, Levon ; Marjanovic, Damir ; Kushniarevich, Alena ; Behar, Doron M. ; Gilissen, Christian ; Vissers, Lisenka ; Veltman, Joris A. ; Balanovska, Elena ; Derenko, Miroslava ; Malyarchuk, Boris ; Metspalu, Andres ; Fedorova, Sardana ; Eriksson, Anders ; Manica, Andrea ; Mendez, Fernando L. ; Karafet, Tatiana M. ; Veeramah, Krishna R. ; Bradman, Neil ; Hammer, Michael F. ; Osipova, Ludmila P. ; Balanovsky, Oleg ; Khusnutdinova, Elza K. ; Johnsen, Knut ; Remm, Maido ; Thomas, Mark G. ; Tyler-Smith, Chris ; Underhill, Peter A. ; Willerslev, Eske ; Nielsen, Rasmus ; Metspalu, Mait ; Villems, Richard ; Kivisild, Toomas

Genome Research, 2015, Vol.25(4), pp.459-466 [Peer Reviewed Journal]

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Population differentiation as an indicator of recent positive selection in humans: an empirical evaluation.(Report)(Author abstract)

Yali Xue ; Xuelong Zhang ; Huang, Ni ; Daly, Allan ; Gillson, Christopher J. ; Macarthur, Daniel G. ; Yngvadottir, Bryndis ; Nica, Alexandra C. ; Woodwark, Cara ; Yuan Chen ; Conrad, Donald F. ; Ayub, Qasim ; Mehdi, S. Qasim ; Pu Li ; Tyler - Smith, Chris

Genetics, Nov, 2009, Vol.183(3), p.1065(13) [Peer Reviewed Journal]

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Human Y chromosome copy number variation in the next generation sequencing era and beyond.(Review)

Massaia, Andrea ; Xue, Yali

Human Genetics, 2017, Vol.136(5), p.591(13) [Peer Reviewed Journal]

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6
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Evolutionary genetics of the human Rh blood group system.(ORIGINAL INVESTIGATION)

Perry, George H. ; Xue, Yali ; Smith, Richard S. ; Meyer, Wynn K. ; Caliskan, Minal ; Yanez - Cuna, Omar ; Lee, Arthur S. ; Gutierrez - Arcelus, Maria ; Ober, Carole ; Hollox, Edward J. ; Tyler - Smith, Chris ; Lee, Charles

Human Genetics, July, 2012, Vol.131(7), p.1205(12) [Peer Reviewed Journal]

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A systematic, large-scale resequencing screen of X-chromosome coding exons in mental retardation

Tarpey, Patrick ; Smith, Raffaella ; Pleasance, Erin ; Whibley, Annabel ; Edkins, Sarah ; Hardy, Claire ; O'Meara, Sarah ; Latimer, Calli ; Dicks, Ed ; Menzies, Andrew ; Stephens, Phil ; Blow, Matt ; Greenman, Chris ; Xue, Yali ; Tyler-Smith, Chris ; Thompson, Deborah ; Gray, Kristian ; Andrews, Jenny ; Barthorpe, Syd ; Buck, Gemma ; Cole, Jennifer ; Dunmore, Rebecca ; Jones, David ; Maddison, Mark ; Mironenko, Tatiana ; Turner, Rachel ; Turrell, Kelly ; Varian, Jennifer ; West, Sofie ; Widaa, Sara ; Wray, Paul ; Teague, Jon ; Butler, Adam ; Jenkinson, Andrew ; Jia, Mingming ; Richardson, David ; Shepherd, Rebecca ; Wooster, Richard ; Tejada, M ; Martinez, Francisco ; Carvill, Gemma ; Goliath, Rene ; de Brouwer, Arjan ; van Bokhoven, Hans ; Van Esch, Hilde ; Chelly, Jamel ; Raynaud, Martine ; Ropers, Hans-Hilger ; Abidi, Fatima ; Srivastava, Anand ; Cox, James ; Luo, Ying ; Mallya, Uma ; Moon, Jenny ; Parnau, Josef ; Mohammed, Shehla ; Tolmie, John ; Shoubridge, Cheryl ; Corbett, Mark ; Gardner, Alison ; Haan, Eric ; Rujirabanjerd, Sinitdhorn ; Shaw, Marie ; Vandeleur, Lucianne ; Fullston, Tod ; Easton, Douglas ; Boyle, Jackie ; Partington, Michael ; Hackett, Anna ; Field, Michael ; Skinner, Cindy ; Stevenson, Roger ; Bobrow, Martin ; Turner, Gillian ; Schwartz, Charles ; Gecz, Jozef ; Raymond, F ; Futreal, P ; Stratton, Michael

Nature Genetics, May 2009, Vol.41(5), pp.535-43 [Peer Reviewed Journal]

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Structural variation on the human Y chromosome from population-scale resequencing.(FORENSIC SCEINECE)(Report)

Espinosa, Jose Rodrigo Flores ; Ayub, Qasim ; Chen, Yuan ; Xue, Yali ; Tyler - Smith, Chris

Croatian Medical Journal, June, 2015, Vol.56(3), p.194(14) [Peer Reviewed Journal]

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