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1
Nuclear RNA-seq of single neurons reveals molecular signatures of activation
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Nuclear RNA-seq of single neurons reveals molecular signatures of activation

Lacar, Benjamin ; Linker, Sara B ; Jaeger, Baptiste N ; Krishnaswami, Suguna Rani ; Barron, Jerika J ; Kelder, Martijn J. E ; Parylak, Sarah L ; Paquola, Apuã C. M ; Venepally, Pratap ; Novotny, Mark ; O'Connor, Carolyn ; Fitzpatrick, Conor ; Erwin, Jennifer A ; Hsu, Jonathan Y ; Husband, David ; McConnell, Michael J ; Lasken, Roger ; Gage, Fred H

Nature communications, 2016, Vol.7 (1), p.11022 [Peer Reviewed Journal]

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2
A novel environment-evoked transcriptional signature predicts reactivity in single dentate granule neurons
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A novel environment-evoked transcriptional signature predicts reactivity in single dentate granule neurons

Jaeger, Baptiste N ; Linker, Sara B ; Parylak, Sarah L ; Barron, Jerika J ; Gallina, Iryna S ; Saavedra, Christian D ; Fitzpatrick, Conor ; Lim, Christina K ; Schafer, Simon T ; Lacar, Benjamin ; Jessberger, Sebastian ; Gage, Fred H

Nature communications, 2018, Vol.9 (1), p.1-15 [Peer Reviewed Journal]

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3
Robust single-cell DNA methylome profiling with snmC-seq2
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Robust single-cell DNA methylome profiling with snmC-seq2

Luo, Chongyuan ; Rivkin, Angeline ; Zhou, Jingtian ; Sandoval, Justin P ; Kurihara, Laurie ; Lucero, Jacinta ; Castanon, Rosa ; Nery, Joseph R ; Pinto-Duarte, António ; Bui, Brian ; Fitzpatrick, Conor ; O’Connor, Carolyn ; Ruga, Seth ; Van Eden, Marc E ; Davis, David A ; Mash, Deborah C ; Behrens, M. Margarita ; Ecker, Joseph R

Nature communications, 2018, Vol.9 (1), p.3824-6 [Peer Reviewed Journal]

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4
Differentiation of Inflammation-Responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells
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Differentiation of Inflammation-Responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells

Santos, Renata ; Vadodaria, Krishna C ; Jaeger, Baptiste N ; Mei, Arianna ; Lefcochilos-Fogelquist, Sabrina ; Mendes, Ana P.D ; Erikson, Galina ; Shokhirev, Maxim ; Randolph-Moore, Lynne ; Fredlender, Callie ; Dave, Sonia ; Oefner, Ruth ; Fitzpatrick, Conor ; Pena, Monique ; Barron, Jerika J ; Ku, Manching ; Denli, Ahmet M ; Kerman, Bilal E ; Charnay, Patrick ; Kelsoe, John R ; Marchetto, Maria C ; Gage, Fred H

Stem cell reports, 2017, Vol.8 (6), p.1757-1769 [Peer Reviewed Journal]

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5
Corrigendum: Nuclear RNA-seq of single neurons reveals molecular signatures of activation
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Corrigendum: Nuclear RNA-seq of single neurons reveals molecular signatures of activation

Lacar, Benjamin ; Linker, Sara B ; Jaeger, Baptiste N ; Krishnaswami, Suguna Rani ; Barron, Jerika J ; Kelder, Martijn J E ; Parylak, Sarah L ; Paquola, Apuã C M ; Venepally, Pratap ; Novotny, Mark ; O'Connor, Carolyn ; Fitzpatrick, Conor ; Erwin, Jennifer A ; Hsu, Jonathan Y ; Husband, David ; McConnell, Michael J ; Lasken, Roger ; Gage, Fred H

Nature communications, 2017-03-17, Vol.8, p.15047 [Peer Reviewed Journal]

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6
Monitoring LHCb Trigger developments using nightly integration tests and a new interactive web UI
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Monitoring LHCb Trigger developments using nightly integration tests and a new interactive web UI

Currie, Robert ; Fitzpatrick, Conor Betev, L ; Smirnova, O ; Forti, A ; Hristov, P ; Litmaath, M

EPJ Web of conferences, 2019, Vol.214, p.5042 [Peer Reviewed Journal]

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7
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
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Simultaneous profiling of 3D genome structure and DNA methylation in single human cells

Lee, Dong-Sung ; Luo, Chongyuan ; Zhou, Jingtian ; Chandran, Sahaana ; Rivkin, Angeline ; Bartlett, Anna ; Nery, Joseph R ; Fitzpatrick, Conor ; O’Connor, Carolyn ; Dixon, Jesse R ; Ecker, Joseph R

Nature methods, 2019, Vol.16 (10), p.999-1006 [Peer Reviewed Journal]

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8
Digitising a consultant radiographer led palliative radiotherapy service
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Digitising a consultant radiographer led palliative radiotherapy service

Fitzpatrick, Conor

Radiography, 2020-01, Vol.26, p.S22-S22 [Peer Reviewed Journal]

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9
The upgrade of the LHCb trigger system
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The upgrade of the LHCb trigger system

Albrecht, J ; Fitzpatrick, C ; Gligorov, V. V ; Raven, G

Journal of instrumentation, 2014-10-01, Vol.9 (10) [Peer Reviewed Journal]

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10
Machine Learning in High Energy Physics Community White Paper
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Machine Learning in High Energy Physics Community White Paper

Albertsson, Kim ; Altoe, Piero ; Anderson, Dustin ; Andrews, Michael ; Araque Espinosa, Juan Pedro ; Aurisano, Adam ; Basara, Laurent ; Bevan, Adrian ; Bhimji, Wahid ; Bonacorsi, Daniele ; Calafiura, Paolo ; Campanelli, Mario ; Capps, Louis ; Carminati, Federico ; Carrazza, Stefano ; Childers, Taylor ; Coniavitis, Elias ; Cranmer, Kyle ; David, Claire ; Davis, Douglas ; Duarte, Javier ; Erdmann, Martin ; Eschle, Jonas ; Farbin, Amir ; Feickert, Matthew ; Castro, Nuno Filipe ; Fitzpatrick, Conor ; Floris, Michele ; Forti, Alessandra ; Garra-Tico, Jordi ; Gemmler, Jochen ; Girone, Maria ; Glaysher, Paul ; Gleyzer, Sergei ; Gligorov, Vladimir ; Golling, Tobias ; Graw, Jonas ; Gray, Lindsey ; Greenwood, Dick ; Hacker, Thomas ; Harvey, John ; Hegner, Benedikt ; Heinrich, Lukas ; Hooberman, Ben ; Junggeburth, Johannes ; Kagan, Michael ; Kane, Meghan ; Kanishchev, Konstantin ; Karpiński, Przemysław ; Kassabov, Zahari ; Kaul, Gaurav ; Kcira, Dorian ; Keck, Thomas ; Klimentov, Alexei ; Kowalkowski, Jim ; Kreczko, Luke ; Kurepin, Alexander ; Kutschke, Rob ; Kuznetsov, Valentin ; Köhler, Nicolas ; Lakomov, Igor ; Lannon, Kevin ; Lassnig, Mario ; Limosani, Antonio ; Louppe, Gilles ; Mangu, Aashrita ; Mato, Pere ; Meinhard, Helge ; Menasce, Dario ; Moneta, Lorenzo ; Moortgat, Seth ; Narain, Meenakshi ; Neubauer, Mark ; Newman, Harvey ; Pabst, Hans ; Paganini, Michela ; Paulini, Manfred ; Perdue, Gabriel ; Perez, Uzziel ; Picazio, Attilio ; Pivarski, Jim ; Prosper, Harrison ; Psihas, Fernanda ; Radovic, Alexander ; Reece, Ryan ; Rinkevicius, Aurelius ; Rodrigues, Eduardo ; Rorie, Jamal ; Rousseau, David ; Sauers, Aaron ; Schramm, Steven ; Schwartzman, Ariel ; Severini, Horst ; Seyfert, Paul ; Siroky, Filip ; Skazytkin, Konstantin ; Sokoloff, Mike ; Stewart, Graeme ; Stienen, Bob ; Stockdale, Ian ; ...

Journal of physics. Conference series, 2018, Vol.1085 (2), p.022008 [Peer Reviewed Journal]

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