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1
SQC: secure quality control for meta-analysis of genome-wide association studies
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SQC: secure quality control for meta-analysis of genome-wide association studies

Huang, Zhicong ; Lin, Huang ; Fellay, Jacques ; Kutalik, Zoltán ; Hubaux, Jean-Pierre Valencia, Alfonso

Bioinformatics (Oxford, England), 2017-08-01, Vol.33 (15), p.2273-2280 [Peer Reviewed Journal]

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2
Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: An independent large-scale comparison
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Genome-wide DNA methylation detection by MethylCap-seq and Infinium HumanMethylation450 BeadChips: An independent large-scale comparison

Meyer, Thorsten ; Bady, Pierre ; Trooskens, Geert ; Kurscheid, Sebastian ; Bloch, Jocelyne ; Kros, Johan ; Hainfellner, Johannes ; Stupp, Roger ; Delorenzi, Mauro ; Hegi, Monika ; Criekinge, Wim

Scientific reports, 2015-10-20, Vol.5, p.15375 [Peer Reviewed Journal]

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3
Evaluation and application of summary statistic imputation to discover new height-associated loci
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Evaluation and application of summary statistic imputation to discover new height-associated loci

Rüeger, Sina ; McDaid, Aaron ; Kutalik, Zoltán Epstein, Michael P

PLoS genetics, 2018-05, Vol.14 (5), p.e1007371-e1007371

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4
Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression
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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

Wray, Naomi R ; Ripke, Stephan ; Mattheisen, Manuel ; Trzaskowski, MacIej ; Byrne, Enda M ; Abdellaoui, Abdel ; Adams, Mark J ; Agerbo, Esben ; Air, Tracy M ; Andlauer, Till M. F ; Bacanu, Silviu-Alin ; Bækvad-Hansen, Marie ; Beekman, Aartjan F. T ; Bigdeli, Tim B ; Binder, Elisabeth B ; Blackwood, Douglas R. H ; Bryois, Julien ; Buttenschøn, Henriette N ; Bybjerg-Grauholm, Jonas ; Cai, Na ; Castelao, Enrique ; Christensen, Jane Hvarregaard ; Clarke, Toni-Kim ; Coleman, Jonathan I. R ; Coloo-Conde, Lucía ; Couvy-Duchesne, Baptiste ; Craddock, Nick ; Crawford, Gregory E ; Crowley, Cheynna A ; Dashti, Hassan S ; Davies, Gail ; Deary, Ian J ; Degenhardt, Franziska ; Derks, Eske M ; DIrek, Nese ; Dolan, Conor V ; Dunn, Erin C ; Eley, Thalia C ; Eriksson, Nicholas ; Escott-Price, Valentina ; Kiadeh, Farnush Hassan Farhadi ; Finucane, Hilary K ; Forstner, Aneas J ; Frank, Josef ; Gaspar, H. léna A ; Gill, Michael ; Giusti-Roíguez, Paola ; Goes, Fernando S ; Gordon, Scott D ; Grove, Jakob ; Hall, Lynsey S ; Hannon, Eilis ; Hansen, Christine S. holm ; Hansen, Thomas F ; Herms, Stefan ; Hickie, Ian B ; Hoffmann, Per ; Homuth, Georg ; Horn, Carsten ; Hottenga, Jouke-Jan ; Hougaard, David M ; Hu, Ming ; Hyde, Craig L ; Ising, Marcus ; Jansen, Rick ; Jin, Fulai ; Jorgenson, Eric ; Knowles, James A ; Kohane, Isaac S ; Kraft, Julia ; Kretzschmar, Warren W ; Krogh, Jesper ; Kutalik, Zoltán ; Lane, Jacqueline M ; Li, Yihan ; Li, Yun ; Lind, Penelope A ; Liu, Xiaoxiao ; Lu, Leina ; MacIntyre, Donald J ; MacKinnon, Dean F ; Maier, Robert M ; Maier, Wolfgang ; Marchini, Jonathan ; Mbarek, Hamdi ; McGrath, Patrick ; McGuffin, Peter ; Medland, Sarah E ; Mehta, D. Ivya ; Middeldorp, Christel M ; Mihailov, Evelin ; Milaneschi, Yuri ; Milani, Lili ; Mill, Jonathan ; Mondimore, Francis M ; Montgomery, Grant W ; Mostafavi, Sara ; Mullins, Niamh ; Nauck, Matthias ; Ng, Bernard ; ...

Nature genetics, 2018, Vol.50 (5), p.668-681 [Peer Reviewed Journal]

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5
Fast and Rigorous Computation of Gene and Pathway Scores from SNP-Based Summary Statistics
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Fast and Rigorous Computation of Gene and Pathway Scores from SNP-Based Summary Statistics

Lamparter, David ; Marbach, Daniel ; Rueedi, Rico ; Kutalik, Zoltán ; Bergmann, Sven Listgarten, Jennifer

PLoS computational biology, 2016-01, Vol.12 (1), p.e1004714-e1004714

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6
Meta-Analysis of Genome-Wide Association Studies for Abdominal Aortic Aneurysm Identifies Four New Disease-Specific Risk Loci
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Meta-Analysis of Genome-Wide Association Studies for Abdominal Aortic Aneurysm Identifies Four New Disease-Specific Risk Loci

Jones, G.T ; Tromp, G ; Kuivaniemi, H ; Gretarsdottir, S ; Baas, A.F ; Giusti, B ; Strauss, E ; Hof, F.N. van 't ; Webb, T.R ; Erdman, R ; Ritchie, M.D ; Elmore, J.R ; Verma, A ; Pendergrass, S ; Kullo, I.J ; Ye, Z ; Peissig, P.L ; Gottesman, O ; Verma, S.S ; Malinowski, J ; Rasmussen-Torvik, L.J ; Borthwick, K.M ; Smelser, D.T ; Crosslin, D.R ; Anade, M. de ; Ryer, E.J ; McCarty, C.A ; Bottinger, E.P ; Pacheco, J.A ; Crawford, D.C ; Carrell, D.S ; Gerhard, G.S ; Franklin, D.P ; Carey, D.J ; Phillips, V.L ; Williams, M.J ; Wei, W ; Blair, R ; Hill, A.A ; Vasudevan, T.M ; Lewis, D.R ; Thomson, I.A ; Krysa, J ; Hill, G.B ; Roake, J ; Merriman, T.R ; Oszkinis, G ; Galora, S ; Saracini, C ; Abbate, R ; Pulli, R ; Pratesi, C ; Saratzis, A ; Verissimo, A.R ; Bumpstead, S ; Badger, S.A ; Clough, R.E ; Cockerill, G ; Hafez, H ; Scott, D.J ; Futers, T.S ; Romaine, S.P ; Bridge, K ; Griffin, K.J ; Bailey, M.A ; Smith, A ; Thompson, M.M ; Bockxmeer, F.M. van ; Matthiasson, S.E ; Thorleifsson, G ; Thorsteinsdottir, U ; Blankensteijn, J.D ; Teijink, J.A ; Wijmenga, C ; Graaf, J. de ; Kiemeney, L.A.L.M ; Lindholt, J.S ; Hughes, A ; Bradley, D.T ; Stirrups, K ; Golledge, J ; Norman, P.E ; Powell, J.T ; Humphries, S.E ; Hamby, S.E ; Goodall, A.H ; Nelson, C.P ; Sakalihasan, N ; Courtois, A ; Ferrell, R.E ; Eriksson, P ; Folkersen, L ; Franco-Cereceda, A ; Eicher, J.D ; Johnson, A.D ; Betsholtz, C ; Ruusalepp, A ; Franzen, O ; Schadt, E.E ; Bjorkegren, J.L ; ...

Circulation research, 2017, Vol.120 (2), p.341-353 [Peer Reviewed Journal]

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7
Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences
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Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences

Karlsson Linnér, Richard ; Biroli, Pietro ; Kong, Edward ; Meddens, S Fleur W ; Wedow, Robbee ; Fontana, Mark Alan ; Lebreton, Maël ; Tino, Stephen P ; Abdellaoui, Abdel ; Hammerschlag, Anke R ; Nivard, Michel G ; Okbay, Aysu ; Rietveld, Cornelius A ; Timshel, Pascal N ; Trzaskowski, Maciej ; Vlaming, Ronald de ; Zünd, Christian L ; Bao, Yanchun ; Buzdugan, Laura ; Caplin, Ann H ; Chen, Chia-Yen ; Eibich, Peter ; Fontanillas, Pierre ; Gonzalez, Juan R ; Joshi, Peter K ; Karhunen, Ville ; Kleinman, Aaron ; Levin, Remy Z ; Lill, Christina M ; Meddens, Gerardus A ; Muntané, Gerard ; Sanchez-Roige, Sana ; Rooij, Frank J van ; Taskesen, Erdogan ; Wu, Yang ; Zhang, Futao ; Auton, Adam ; Boardman, Jason D ; Clark, David W ; Conlin, Anew ; Fischbacher, Urs ; Groenen, Patrick J F ; Harris, Kathleen Mullan ; Hasler, Gregor ; Hofman, Albert ; Ikram, Mohammad A ; Jain, Sonia ; Karlsson, Robert ; Kessler, Ronald C

Nature genetics, 2019-02, Vol.51 (2), p.245-257 [Peer Reviewed Journal]

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8
Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence
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Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence

Savage, Jeanne E ; Jansen, Philip R ; Stringer, Sven ; Watanabe, Kyoko ; Bryois, Julien ; de Leeuw, Christiaan A ; Nagel, Mats ; Awasthi, Swapnil ; Barr, Peter B ; Coleman, Jonathan R I ; Grasby, Katrina L ; Hammerschlag, Anke R ; Kaminski, Jakob A ; Karlsson, Robert ; Krapohl, Eva ; Lam, Max ; Nygaard, Marianne ; Reynolds, Chana A ; Trampush, Joey W ; Young, Hannah ; Zabaneh, Delilah ; Hägg, Sara ; Hansell, Narelle K ; Karlsson, Ida K ; Linnarsson, Sten ; Montgomery, Grant W ; Muñoz-Manchado, Ana B ; Quinlan, Erin B ; Schumann, Gunter ; Skene, Nathan G ; Webb, Bradley T ; White, Tonya ; Arking, Dan E ; Avramopoulos, Dimitrios ; Bilder, Robert M ; Bitsios, Panos ; Burdick, Katherine E ; Cannon, Tyrone D ; Chiba-Falek, Ornit ; Christoforou, Anea ; Cirulli, Elizabeth T ; Congdon, Eliza ; Corvin, Aiden ; Davies, Gail ; Deary, Ian J ; DeRosse, Pamela ; Dickinson, Dwight ; Djurovic, Srdjan ; Donohoe, Gary ; Conley, Emily bant ; Eriksson, Johan G ; Espeseth, Thomas ; Freimer, Nelson A ; Giakoumaki, Stella ; Giegling, Ina ; Gill, Michael ; Glahn, David C ; Hariri, Ahmad R ; Hatzimanolis, Alex ; Keller, Matthew C ; Knowles, Emma ; Koltai, Deborah ; Konte, Bettina ; Lahti, Jari ; Le Hellard, Stephanie ; Lencz, Todd ; Liewald, David C ; London, Edythe ; Lundervold, Astri J ; Malhotra, Anil K ; Melle, Ingrid ; Morris, Derek ; Need, Anna C ; Ollier, William ; Palotie, Aarno ; Payton, Antony ; Pendleton, Neil ; Polack, Russell A ; Räikkönen, Katri ; Reinvang, Ivar ; Roussos, Panos ; Rujescu, Dan ; Sabb, Fred W ; Scult, Matthew A ; Smeland, Olav B ; Smyrnis, Nikolaos ; Starr, John M ; Steen, Vidar M ; Stefanis, Nikos C ; Straub, Richard E ; Sundet, Kjetil ; Tiemeier, Henning ; Voineskos, Aristotle N ; Weinberger, Daniel R ; Widen, Elisabeth ; Yu, Jin ; Abecasis, Goncalo ; Aneassen, Ole A ; Breen, Gerome ; Christiansen, Lene ; ...

Nature genetics, 2018-07-01, Vol.50 (7), p.912-919 [Peer Reviewed Journal]

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9
Reevaluation of SNP heritability in complex human traits
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Reevaluation of SNP heritability in complex human traits

Speed, Doug ; Cai, Na ; Johnson, Michael R ; Nejentsev, Sergey ; Balding, David J

Nature genetics, 2017-07, Vol.49 (7), p.986-992 [Peer Reviewed Journal]

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10
Large-scale genomic analyses link reproductive aging to hypothalamic signaling, breast cancer susceptibility and BRCA1-mediated DNA repair
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Large-scale genomic analyses link reproductive aging to hypothalamic signaling, breast cancer susceptibility and BRCA1-mediated DNA repair

Day, Felix R ; Ruth, Katherine S ; Thompson, Deborah J ; Lunetta, Kathryn L ; Pervjakova, Natalia ; Chasman, Daniel I ; Stolk, Lisette ; Finucane, Hilary K ; Sulem, Patrick ; Bulik-Sullivan, Brendan ; Esko, Tonu ; Johnson, Anew D ; Elks, Cathy E ; Franceschini, Nora ; He, Chunyan ; Altmaier, Elisabeth ; Brody, Jennifer A ; Franke, Lude L ; Huffman, Jennifer E ; Keller, Margaux F ; McArdle, Patrick F ; Nutile, Teresa ; Porcu, Eleonora ; Robino, Antonietta ; Rose, Lynda M ; Schick, Ursula M ; Smith, Jennifer A ; Teumer, Alexander ; Traglia, Michela ; Vuckovic, gana ; Yao, Jie ; Zhao, Wei ; Albrecht, Eva ; Amin, Najaf ; Corre, Tanguy ; Hottenga, Jouke-Jan ; Mangino, Massimo ; Smith, Albert V ; Tanaka, Toshiko ; Abecasis, Goncalo R ; Anulis, Irene L ; Anton-Culver, Hoda ; Antoniou, Antonis C ; Arndt, Volker ; Arnold, Alice M ; Barbieri, Caterina ; Beckmann, Matthias W ; Beeghly-Fadiel, Alicia ; Wolffenbuttel, Bruce B. H. R ; Alizadeh, Behrooz Z

Nature genetics, 2015-11, Vol.47 (11), p.1294-303 [Peer Reviewed Journal]

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